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AS Event Filtering
Body Site:
All
Blood
Brain
Colon
Embryonic stem cell
Eye
Heart
Kidney
Liver
Lung
Pancreas
Placenta
Respiratory track
sopharynx
Stomach
Testis
Sample type:
All
Tissue
Cell line
Organoid
Sample name:
All
A549
A549-ACE2
Basophils
BEAS-2B
Blood
Bronchi
Bronchial epithelial cells
Bronchial epithelium organoids
Caco-2
Calu-3
Calu3
CD8 T cells
Classical monocytes
Cornea
EC cells
Fetal stomach
Foreskin
Frontal cortex
H522
HCT116
Heart
HEK293T
HepG2
hESC pancreas
hESC-derived cardiomyocyte
hESC-derived macrophage
hESC-derived peripheral neurons
HFF cells
hiPSC-derived choroid plexus organoids
hiPSC-derived intestil organoids
hPSC-derived alveolar epithelial type II-like cells
hPSC-derived cardiomyocyte
hPSC-derived colon organoids
hPSC-derived lung organoids
hPSC-derived pancreatic cells
HT29
Ileum
Intestil organoids
iPS cells
Leukocyte
Limbus
Liver organoid
Lung
Lung organoid
Monocytes
Myeloid dendritic cells
Neutrophils
NHBE
Non-classical monocytes
NP Swab cells
NPC cells (ES-derived)
Pancreatic islets
PBMC
Pediatric stomach
pHAE
Placenta
Plasmacytoid dendritic cells
PLC/PRF/5
PSC-derived alveolar epithelial type II-like cells
purified G-MDSC
Rel epithelial cells
sal epithelial cells
sal turbite
Sclera
THP-1
WTC11c hiPSCs
AS type:
All
A3SS
A5SS
RI
SE
MXE
Gene:
Country/Region:
All
Argentina
Canada
China
France
Germany
Israel
Italy
Japan
Netherlands
Singapore
South Korea
Spain
Sweden
United Kingdom
USA
Microbe:
All
AIDS
Bacterial
Control/Healthy
COVID-19
Dengue virus 2
HCMV
HSV-1
Influenza
Influenza A virus
SARS-CoV
Seasol corovirus
Viremia
Project ID:
All
GSE147507
GSE148696
GSE148697
GSE149312
GSE150819
GSE151513
GSE151803
GSE152060
GSE152418
GSE153277
GSE153610
GSE153684
GSE153970
GSE154613
GSE154936
GSE155241
GSE157059
GSE157103
GSE157852
GSE159201
GSE159522
GSE159678
GSE159717
GSE160351
GSE160435
GSE161281
GSE161731
GSE162131
GSE162736
GSE162899
GSE163547
GSE163959
GSE164073
GSE164332
GSE165025
GSE165373
GSE165461
GSE165890
GSE166209
GSE166990
GSE167480
GSE169158
GSE169159
GSE169241
GSE169370
GSE171110
GSE171995
GSE172274
GSE174786
GSE175779
GSE178824
GSE206263
GSE59717
GSE61517
GSE74250
GSE84285
PRJNA420459
PRJNA649976
PRJNA753626
GSE201530
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#
GEO/Project ID
Number of samples
Microbe
Body site
Sample type
Sample name
Disease stage
Group info
Country
PubMed ID
GO/KEGG
NCBI
1
GSE171995
10
Control/Healthy
COVID-19
Placenta
Tissue
Placenta
materl SARS-CoV-2-,placenta SARS-CoV-2 -
materl SARS-CoV-2+,plac
USA
33969332
Gene Ontology(GO)
KEGG Pathway
NCBI GEO DB
2
GSE166209
19
Control/Healthy
COVID-19
Lung
Cell line
Calu3
USA
34010142
Gene Ontology(GO)
KEGG Pathway
NCBI GEO DB
3
GSE164073
72
Control/Healthy
COVID-19
Eye
Tissue
Cornea
Limbus
Sclera
USA
34022129
Gene Ontology(GO)
KEGG Pathway
NCBI GEO DB
4
GSE164332
16
Control/Healthy
COVID-19
Brain
Tissue
Frontal cortex
Italy
34022369
Gene Ontology(GO)
KEGG Pathway
NCBI GEO DB
5
GSE165373
10
COVID-19
Blood
Cell line
Blood
Convalescent
USA
34063463
Gene Ontology(GO)
KEGG Pathway
NCBI GEO DB
6
GSE171110
430
Control/Healthy
COVID-19
Blood
Tissue
Blood
Healthy
Severe
France
34127958
Gene Ontology(GO)
KEGG Pathway
NCBI GEO DB
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